STRINGSTRING
deoA deoA h16_A2022 h16_A2022 upp1 upp1 upp2 upp2 h16_B0558 h16_B0558 ssnA ssnA codA codA surE surE h16_B0594 h16_B0594 h16_A2914 h16_A2914 h16_A3062 h16_A3062
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
deoAThymidine phosphorylase. (520 aa)    
Predicted Functional Partners:
h16_A2022
Putative RNA Modifying Enzyme.
    0.962
upp1
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.947
upp2
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.947
h16_B0558
Two domain protein: Guanylate kinase and thymidin phosphorylase domain; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP); In the N-terminal section; belongs to the ribose 1,5- bisphosphokinase family.
  
  
 
0.918
ssnA
Cytosine deaminase or related metal-dependent hydrolase.
    
 0.917
codA
Cytosine deaminase.
    
 0.917
surE
Stationary phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.916
h16_B0594
Predicted acid phosphatase.
    
 0.916
h16_A2914
Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
    
 0.915
h16_A3062
Conserved hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
 0.915
Your Current Organism:
Cupriavidus necator
NCBI taxonomy Id: 381666
Other names: Alcaligenes eutropha H16, C. necator H16, Cupriavidus necator ATCC 17699, Cupriavidus necator H16, Ralstonia eutropha ATCC 17699, Ralstonia eutropha H16, Ralstonia eutropha str. H16, Ralstonia eutropha strain H16, Wautersia eutropha H16
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