Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aceB | aimE | H16_A2217 | H16_B2459 | Malate synthase; Belongs to the malate synthase family. | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.828 |
aceB | fmdA1 | H16_A2217 | H16_B0072 | Malate synthase; Belongs to the malate synthase family. | Formamidase. | 0.811 |
aceB | fumA | H16_A2217 | H16_A2528 | Malate synthase; Belongs to the malate synthase family. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.942 |
aceB | h16_A2814 | H16_A2217 | H16_A2814 | Malate synthase; Belongs to the malate synthase family. | Predicted metal-dependent hydrolase/Putative cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. | 0.808 |
aceB | h16_B1997 | H16_A2217 | H16_B1997 | Malate synthase; Belongs to the malate synthase family. | Putative aylformamidase. | 0.824 |
aceB | mdh1 | H16_A2217 | H16_A2634 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.933 |
aceB | pyc | H16_A2217 | H16_A1251 | Malate synthase; Belongs to the malate synthase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.855 |
aimE | aceB | H16_B2459 | H16_A2217 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Malate synthase; Belongs to the malate synthase family. | 0.828 |
aimE | fmdA1 | H16_B2459 | H16_B0072 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Formamidase. | 0.964 |
aimE | fumA | H16_B2459 | H16_A2528 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.817 |
aimE | h16_A2814 | H16_B2459 | H16_A2814 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Predicted metal-dependent hydrolase/Putative cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. | 0.819 |
aimE | h16_B1997 | H16_B2459 | H16_B1997 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Putative aylformamidase. | 0.837 |
aimE | mdh1 | H16_B2459 | H16_A2634 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.840 |
aimE | pyc | H16_B2459 | H16_A1251 | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.811 |
fmdA1 | aceB | H16_B0072 | H16_A2217 | Formamidase. | Malate synthase; Belongs to the malate synthase family. | 0.811 |
fmdA1 | aimE | H16_B0072 | H16_B2459 | Formamidase. | Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.964 |
fmdA1 | fumA | H16_B0072 | H16_A2528 | Formamidase. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.827 |
fmdA1 | h16_A2814 | H16_B0072 | H16_A2814 | Formamidase. | Predicted metal-dependent hydrolase/Putative cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. | 0.822 |
fmdA1 | h16_B1997 | H16_B0072 | H16_B1997 | Formamidase. | Putative aylformamidase. | 0.818 |
fmdA1 | mdh1 | H16_B0072 | H16_A2634 | Formamidase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.807 |
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