STRINGSTRING
pgk pgk tpiA tpiA Rcas_3283 Rcas_3283 eno eno Rcas_1157 Rcas_1157 Rcas_2314 Rcas_2314 gpmI gpmI pgi pgi Rcas_1692 Rcas_1692 Rcas_3330 Rcas_3330 Rcas_3487 Rcas_3487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
pgkPFAM: phosphoglycerate kinase; KEGG: rrs:RoseRS_1473 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (395 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
 0.998
Rcas_3283
KEGG: rrs:RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.997
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
 
 0.996
Rcas_1157
PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: rrs:RoseRS_0387 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.996
Rcas_2314
KEGG: rrs:RoseRS_1226 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.996
gpmI
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
 
 
 0.984
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: rrs:RoseRS_4356 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.951
Rcas_1692
KEGG: rrs:RoseRS_1428 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
 
 
 0.927
Rcas_3330
PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1012 phosphoglycerate mutase.
  
 
 0.915
Rcas_3487
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_2156 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
    0.852
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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