STRINGSTRING
Ldb0032 Ldb0032 Ldb0031 Ldb0031 Ldb0030 Ldb0030 Ldb0033 Ldb0033 Ldb0029 Ldb0029 Ldb1553 Ldb1553 prtB prtB Ldb0667 Ldb0667 Ldb1987 Ldb1987 pppL pppL lacA lacA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldb0032Putative Ser/Thr protein kinase. (833 aa)    
Predicted Functional Partners:
Ldb0031
ABC transporter, ATP-binding/permease protein.
 
    0.822
Ldb0030
6 Protein of unknown function, without similarity to other proteins.
       0.775
Ldb0033
6 Protein of unknown function, without similarity to other proteins.
       0.716
Ldb0029
Two-component system, sensor histidine kinase (fragment).
       0.705
Ldb1553
6 Protein of unknown function, without similarity to other proteins.
 
     0.578
prtB
Proteinase precursor; Belongs to the peptidase S8 family.
 
   
 0.574
Ldb0667
6 Protein of unknown function, without similarity to other proteins.
 
  
 0.512
Ldb1987
Putative transposase.
  
     0.501
pppL
Serine/threonine protein phosphatase.
  
 
 0.491
lacA
Conserved hypothetical protein (fragment); Similar to ISL5 transposase, part of ISL4-5; Belongs to the 'phage' integrase family.
  
     0.454
Your Current Organism:
Lactobacillus delbrueckii
NCBI taxonomy Id: 390333
Other names: L. delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002, Lactobacillus delbrueckii subsp. bulgaricus DSM 20081
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