STRINGSTRING
Smal_2674 Smal_2674 Smal_0032 Smal_0032 Smal_2675 Smal_2675 Smal_3739 Smal_3739 hmgA hmgA nfuA nfuA Smal_0021 Smal_0021 zupT zupT Smal_2672 Smal_2672 Smal_0482 Smal_0482
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
Smal_2674PFAM: transcriptional coactivator/pterin dehydratase; KEGG: xac:XAC2116 pterin-4-alpha-carbinolamine dehydratase. (116 aa)    
Predicted Functional Partners:
Smal_0032
Phenylalanine-4-hydroxylase; KEGG: xac:XAC0174 phenylalanine 4-monooxygenase; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase.
 
 0.991
Smal_2675
TIGRFAM: TonB family protein; KEGG: xcv:XCV2427 putative secreted protein.
       0.820
Smal_3739
KEGG: xac:XAC0452 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.729
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
  
 0.686
nfuA
HesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
    0.626
Smal_0021
Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: xac:XAC0125 aromatic amino acid aminotransferase.
  
  
 0.611
zupT
Zinc/iron permease; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
       0.563
Smal_2672
KEGG: xcv:XCV2430 hypothetical protein.
  
    0.548
Smal_0482
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: xcv:XCV3731 maleylacetoacetate isomerase.
  
  
 0.523
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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