STRINGSTRING
Sare_2341 Sare_2341 Sare_3392 Sare_3392 panC panC Sare_2960 Sare_2960 Sare_3215 Sare_3215 Sare_2342 Sare_2342 Sare_2957 Sare_2957 Sare_3584 Sare_3584 Sare_3568 Sare_3568 Sare_0238 Sare_0238 Sare_0771 Sare_0771
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2341TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_4374 glutamate decarboxylase; Belongs to the group II decarboxylase family. (466 aa)    
Predicted Functional Partners:
Sare_3392
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: stp:Strop_3167 ferredoxin-dependent glutamate synthase.
    
 0.939
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.932
Sare_2960
PFAM: aminotransferase class-III; KEGG: sco:SCO3622 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.928
Sare_3215
PFAM: aminotransferase class-III; KEGG: stp:Strop_2993 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.928
Sare_2342
PFAM: amino acid permease-associated region; KEGG: stp:Strop_4375 amino acid permease-associated region.
 
  
 0.927
Sare_2957
KEGG: rha:RHA1_ro00339 glutamate dehydrogenase (NAD(P)+).
  
 
 0.917
Sare_3584
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: stp:Strop_3339 glutamine synthetase, type I.
    
 0.913
Sare_3568
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: stp:Strop_3332 glutamine synthetase, type I.
    
 0.911
Sare_0238
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0078 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Sare_0771
PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_0827 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
   
 0.910
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.