Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABO_0106 | ABO_2433 | ABO_0106 | ABO_2433 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | 0.826 |
| ABO_0106 | ABO_2443 | ABO_0106 | ABO_2443 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | Conserved hypothetical protein; Identified by sequencesimilarity. | 0.927 |
| ABO_0106 | cheB | ABO_0106 | ABO_0103 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | (protein-glutamate methylesterase CheB) identified by sequencesimilarity; putative InterPro: CheB methylesterase; High confidence in function and specificity. | 0.992 |
| ABO_0106 | cheR | ABO_0106 | ABO_0105 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | (methyltransferase CheR-like) identified by match to PFAM protein family HMMPF00515; High confidence in function and specificity. | 0.962 |
| ABO_0106 | cheW | ABO_0106 | ABO_0102 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | (chemotaxis protein, putative), pfam01584, CheW, CheW-like domain; conserved hypothetical protein. | 0.983 |
| ABO_0106 | chpA | ABO_0106 | ABO_0104 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | ChpA two-component hybrid sensor and regulator, putative identified by match to TIGR protein family HMMTIGR01387 InterPro: Histidine kinase C-terminal still frameshift probable component of chemotactic signal transduction system; Specificity unclear. | 0.999 |
| ABO_0106 | pilG | ABO_0106 | ABO_0109 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | Identified by sequencesimilarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity. | 0.989 |
| ABO_0106 | pilH | ABO_0106 | ABO_0108 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | Identified by sequence similarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity. | 0.990 |
| ABO_0106 | pilH-2 | ABO_0106 | ABO_0265 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | (PilH; regulatory protein pilH family) identified by sequence similarity; putative InterPro: Response regulator receiver domain; Family membership. | 0.969 |
| ABO_0106 | pilI | ABO_0106 | ABO_0107 | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | Type IV pili signal transduction protein PilI; Identified by match to PFAM protein family HMMPF01584 InterPro: CheW-like domain; High confidence in function and specificity. | 0.998 |
| ABO_2433 | ABO_0106 | ABO_2433 | ABO_0106 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. | 0.826 |
| ABO_2433 | ABO_2443 | ABO_2433 | ABO_2443 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | Conserved hypothetical protein; Identified by sequencesimilarity. | 0.990 |
| ABO_2433 | cheB | ABO_2433 | ABO_0103 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | (protein-glutamate methylesterase CheB) identified by sequencesimilarity; putative InterPro: CheB methylesterase; High confidence in function and specificity. | 0.771 |
| ABO_2433 | cheR | ABO_2433 | ABO_0105 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | (methyltransferase CheR-like) identified by match to PFAM protein family HMMPF00515; High confidence in function and specificity. | 0.800 |
| ABO_2433 | cheW | ABO_2433 | ABO_0102 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | (chemotaxis protein, putative), pfam01584, CheW, CheW-like domain; conserved hypothetical protein. | 0.680 |
| ABO_2433 | chpA | ABO_2433 | ABO_0104 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | ChpA two-component hybrid sensor and regulator, putative identified by match to TIGR protein family HMMTIGR01387 InterPro: Histidine kinase C-terminal still frameshift probable component of chemotactic signal transduction system; Specificity unclear. | 0.914 |
| ABO_2433 | pilG | ABO_2433 | ABO_0109 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | Identified by sequencesimilarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity. | 0.673 |
| ABO_2433 | pilH | ABO_2433 | ABO_0108 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | Identified by sequence similarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity. | 0.673 |
| ABO_2433 | pilH-2 | ABO_2433 | ABO_0265 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | (PilH; regulatory protein pilH family) identified by sequence similarity; putative InterPro: Response regulator receiver domain; Family membership. | 0.673 |
| ABO_2433 | pilI | ABO_2433 | ABO_0107 | Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain. | Type IV pili signal transduction protein PilI; Identified by match to PFAM protein family HMMPF01584 InterPro: CheW-like domain; High confidence in function and specificity. | 0.680 |
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