Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
glmS2 | glnA1 | NGR_c14650 | NGR_c03210 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase protein. | 0.923 |
glmS2 | glnA2 | NGR_c14650 | NGR_c21450 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.923 |
glmS2 | glnA3 | NGR_c14650 | NGR_c14740 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase I; glutamate--ammonia ligase I; GSI. | 0.923 |
glmS2 | glsA | NGR_c14650 | NGR_c16350 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutaminase; Belongs to the glutaminase family. | 0.905 |
glmS2 | gltB1 | NGR_c14650 | NGR_c28690 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase [NADPH] large chain. | 0.955 |
glmS2 | gltD | NGR_c14650 | NGR_c28680 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase [NADPH] small chain. | 0.918 |
glmS2 | murD | NGR_c14650 | NGR_c21090 | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.432 |
glnA1 | glmS2 | NGR_c03210 | NGR_c14650 | Glutamine synthetase protein. | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.923 |
glnA1 | glnA2 | NGR_c03210 | NGR_c21450 | Glutamine synthetase protein. | Glutamine synthetase. | 0.922 |
glnA1 | glnA3 | NGR_c03210 | NGR_c14740 | Glutamine synthetase protein. | Glutamine synthetase I; glutamate--ammonia ligase I; GSI. | 0.920 |
glnA1 | glsA | NGR_c03210 | NGR_c16350 | Glutamine synthetase protein. | Glutaminase; Belongs to the glutaminase family. | 0.912 |
glnA1 | gltB1 | NGR_c03210 | NGR_c28690 | Glutamine synthetase protein. | Glutamate synthase [NADPH] large chain. | 0.972 |
glnA1 | gltD | NGR_c03210 | NGR_c28680 | Glutamine synthetase protein. | Glutamate synthase [NADPH] small chain. | 0.915 |
glnA1 | putA1 | NGR_c03210 | NGR_c00980 | Glutamine synthetase protein. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.920 |
glnA1 | putA2 | NGR_c03210 | NGR_c20320 | Glutamine synthetase protein. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.920 |
glnA2 | glmS2 | NGR_c21450 | NGR_c14650 | Glutamine synthetase. | Isomerizing glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.923 |
glnA2 | glnA1 | NGR_c21450 | NGR_c03210 | Glutamine synthetase. | Glutamine synthetase protein. | 0.922 |
glnA2 | glnA3 | NGR_c21450 | NGR_c14740 | Glutamine synthetase. | Glutamine synthetase I; glutamate--ammonia ligase I; GSI. | 0.918 |
glnA2 | glsA | NGR_c21450 | NGR_c16350 | Glutamine synthetase. | Glutaminase; Belongs to the glutaminase family. | 0.912 |
glnA2 | gltB1 | NGR_c21450 | NGR_c28690 | Glutamine synthetase. | Glutamate synthase [NADPH] large chain. | 0.972 |
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