STRINGSTRING
Aave_2440 Aave_2440 Aave_3282 Aave_3282 Aave_4193 Aave_4193 Aave_4191 Aave_4191 Aave_3283 Aave_3283 hisC hisC Aave_1546 Aave_1546 Aave_3705 Aave_3705 Aave_3888 Aave_3888 Aave_0174 Aave_0174 metK metK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2440PFAM: aminotransferase, class I and II; KEGG: pol:Bpro_2175 aspartate transaminase. (398 aa)    
Predicted Functional Partners:
Aave_3282
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pol:Bpro_1792 chorismate mutase.
    
 0.955
Aave_4193
KEGG: pol:Bpro_4215 phenylalanine-4-hydroxylase, monomeric form; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase.
  
 
 0.953
Aave_4191
KEGG: pol:Bpro_4213 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.950
Aave_3283
PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rfr:Rfer_1568 prephenate dehydrogenase.
    
 0.922
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2947 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.919
Aave_1546
PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2615 aminotransferase, class I and II.
   
 
 0.919
Aave_3705
PFAM: aminotransferase, class I and II; KEGG: psb:Psyr_0117 aminotransferase, class I and II.
   
 0.916
Aave_3888
PFAM: aminotransferase, class I and II; KEGG: bbr:BB1045 aspartate aminotransferase.
   
 0.916
Aave_0174
Methionine synthase (B12-dependent); PFAM: homocysteine S-methyltransferase; KEGG: pol:Bpro_0172 5-methyltetrahydrofolate--homocysteine S-methyltransferase.
     
 0.908
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.908
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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