STRINGSTRING
Msed_1933 Msed_1933 Msed_2291 Msed_2291 carS carS Msed_0681 Msed_0681 Msed_0415 Msed_0415 Msed_2088 Msed_2088 Msed_2089 Msed_2089 Msed_1075 Msed_1075 Msed_1073 Msed_1073 Msed_1934 Msed_1934 Msed_1920 Msed_1920
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Msed_1933Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. (284 aa)    
Predicted Functional Partners:
Msed_2291
Geranylgeranylglyceryl diphosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.984
carS
Protein of unknown function DUF46; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.962
Msed_0681
2,3-di-O-geranylgeranylglyceryl phosphate reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase.
 
 
 0.950
Msed_0415
PFAM: NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.753
Msed_2088
Protoporphyrin IX magnesium-chelatase; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; SMART: AAA ATPase.
 
  
 0.727
Msed_2089
Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase.
 
  
 0.708
Msed_1075
PFAM: Squalene/phytoene synthase.
 
  
 0.601
Msed_1073
TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase.
 
  
 0.598
Msed_1934
Hypothetical protein.
       0.596
Msed_1920
PFAM: H+-transporting two-sector ATPase, C subunit; Belongs to the V-ATPase proteolipid subunit family.
    
  0.569
Your Current Organism:
Metallosphaera sedula
NCBI taxonomy Id: 399549
Other names: M. sedula DSM 5348, Metallosphaera sedula DSM 5348, Metallosphaera sedula IFO 15509, Metallosphaera sedula JCM 9185, Metallosphaera sedula NBRC 15509, Metallosphaera sedula str. DSM 5348, Metallosphaera sedula strain DSM 5348
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