STRINGSTRING
prpC3 prpC3 prsR prsR SACE_4195 SACE_4195 SACE_6594 SACE_6594 SACE_2846 SACE_2846 SACE_4405 SACE_4405 SACE_0097 SACE_0097 SACE_6414 SACE_6414 SACE_6878 SACE_6878 rsbW rsbW rsbW-2 rsbW-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpC3Magnesium or manganese-dependent protein phosphatase. (439 aa)    
Predicted Functional Partners:
prsR
Regulator of sigma factor.
 
 
 0.807
SACE_4195
Putative anti-sigma regulatory factor,serine/threonine protein kinase.
  
 
 0.780
SACE_6594
Hypothetical protein; Thiamine biosynthesis enzyme ThiH.
   
  
 0.741
SACE_2846
Two-component response regulator.
 
  
 0.734
SACE_4405
Hypothetical protein.
  
 
 0.727
SACE_0097
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
  
 0.725
SACE_6414
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
 
  
 0.713
SACE_6878
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
  
 0.675
rsbW
Anti-sigma factor.
  
 
 0.669
rsbW-2
Anti-sigma factor.
  
 
 0.669
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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