node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC1_1151 | RC1_1152 | RC1_1151 | RC1_1152 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | OsmC. | 0.589 |
RC1_1151 | RC1_1376 | RC1_1151 | RC1_1376 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | 0.711 |
RC1_1151 | alaS-2 | RC1_1151 | RC1_1150 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | alanyl-tRNA synthetase AlaS; PF07973. | 0.628 |
RC1_1151 | dapF | RC1_1151 | RC1_2197 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.655 |
RC1_1151 | dbpA | RC1_1151 | RC1_0868 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | ATP-independent RNA helicase protein; Belongs to the DEAD box helicase family. | 0.711 |
RC1_1151 | nnrE | RC1_1151 | RC1_1253 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.962 |
RC1_1151 | prs | RC1_1151 | RC1_1906 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.915 |
RC1_1151 | rnr | RC1_1151 | RC1_1529 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | Ribonuclease R, putative; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.791 |
RC1_1151 | rph | RC1_1151 | RC1_2960 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.701 |
RC1_1151 | sseA | RC1_1151 | RC1_1149 | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | 3-mercaptopyruvate sulfurtransferase; [Synonyms] Rhodanese-like protein. | 0.631 |
RC1_1152 | RC1_1151 | RC1_1152 | RC1_1151 | OsmC. | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | 0.589 |
RC1_1152 | alaS-2 | RC1_1152 | RC1_1150 | OsmC. | alanyl-tRNA synthetase AlaS; PF07973. | 0.416 |
RC1_1152 | sseA | RC1_1152 | RC1_1149 | OsmC. | 3-mercaptopyruvate sulfurtransferase; [Synonyms] Rhodanese-like protein. | 0.445 |
RC1_1376 | RC1_1151 | RC1_1376 | RC1_1151 | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | 0.711 |
RC1_1376 | nnrE | RC1_1376 | RC1_1253 | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.967 |
RC1_1376 | prs | RC1_1376 | RC1_1906 | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.516 |
RC1_1376 | rnr | RC1_1376 | RC1_1529 | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | Ribonuclease R, putative; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.441 |
RC1_1376 | rph | RC1_1376 | RC1_2960 | DeaD; Identified by match to protein family HMM PF01804; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.772 |
alaS-2 | RC1_1151 | RC1_1150 | RC1_1151 | alanyl-tRNA synthetase AlaS; PF07973. | Conserved hypothetical protein; Identified by match to protein family HMM PF00078. | 0.628 |
alaS-2 | RC1_1152 | RC1_1150 | RC1_1152 | alanyl-tRNA synthetase AlaS; PF07973. | OsmC. | 0.416 |