STRINGSTRING
Dalk_2928 Dalk_2928 Dalk_3901 Dalk_3901 Dalk_4201 Dalk_4201 Dalk_0889 Dalk_0889 Dalk_0887 Dalk_0887 Dalk_3586 Dalk_3586 Dalk_1831 Dalk_1831 Dalk_3691 Dalk_3691 Dalk_2929 Dalk_2929 Dalk_0888 Dalk_0888 Dalk_0885 Dalk_0885
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dalk_2928KEGG: dde:Dde_2286 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; IMG reference gene:2503008654; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type. (483 aa)    
Predicted Functional Partners:
Dalk_3901
KEGG: mxa:MXAN_5831 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; IMG reference gene:2503009645; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases.
 
 0.972
Dalk_4201
KEGG: sat:SYN_00231 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; IMG reference gene:2503009948; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases.
 
 0.971
Dalk_0889
KEGG: sat:SYN_02257 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; IMG reference gene:2503006590; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
 
 0.965
Dalk_0887
Amylo-alpha-16-glucosidase; PFAM: alpha amylase catalytic region; Amylo-alpha-16-glucosidase; SMART: alpha amylase catalytic sub domain; KEGG: sat:SYN_00295 glycogen debranching enzyme/alpha-amylase; IMG reference gene:2503006588; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
  
 
 0.933
Dalk_3586
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: gka:GK0199 aldehyde dehydrogenase; IMG reference gene:2503009318; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase.
  
  
 0.843
Dalk_1831
PFAM: glycoside hydrolase family 13 domain protein; KEGG: fno:Fnod_1180 glycoside hydrolase family 13 domain protein; IMG reference gene:2503007543; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
  
 
 0.837
Dalk_3691
PFAM: glycoside hydrolase family 13 domain protein; KEGG: fno:Fnod_1616 glycoside hydrolase family 13 domain protein; IMG reference gene:2503009435; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
  
 
 0.837
Dalk_2929
PFAM: glycosyl transferase family 2; KEGG: sat:SYN_00868 glycosyltransferase involved in cell wall biogenesis; IMG reference gene:2503008655; PFAM: Glycosyl transferase family 2.
    
 0.827
Dalk_0888
PFAM: Starch synthase catalytic domain protein; KEGG: dol:Dole_0848 starch synthase catalytic subunit; IMG reference gene:2503006589; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type.
  
  
 
0.800
Dalk_0885
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cyt:cce_1639 hypothetical protein; IMG reference gene:2503006586; PFAM: Alpha amylase, catalytic domain.
  
 
 0.790
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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