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Dalk_3639 Dalk_3639 Dalk_3403 Dalk_3403 Dalk_2057 Dalk_2057 Dalk_3269 Dalk_3269 Dalk_5096 Dalk_5096 Dalk_3310 Dalk_3310 Dalk_1969 Dalk_1969 Dalk_0681 Dalk_0681 Dalk_0912 Dalk_0912 Dalk_3288 Dalk_3288 Dalk_4395 Dalk_4395
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
Dalk_3639Formyltetrahydrofolate synthetase (Formate-tetrahydrofolate ligase); Catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; IMG reference gene:2503009383; PFAM: Formate--tetrahydrofolate ligase. (587 aa)    
Predicted Functional Partners:
Dalk_3403
PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: dol:Dole_2033 methenyltetrahydrofolate cyclohydrolase; IMG reference gene:2503009135; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain.
 
 
 0.997
Dalk_2057
KEGG: dol:Dole_1427 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylamine/glycine ligase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylglycinamide synthetase; IMG reference gene:2503007774; PFAM: Phosphoribosylglycinamide synthetase, N domain; AIR carboxylase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylaminoimidazole carboxylase, PurE protein.
  
 0.991
Dalk_3269
PFAM: AICARFT/IMPCHase bienzyme formylation region; KEGG: dol:Dole_1516 phosphoribosylaminoimidazolecarboxamide formyltransferase; IMG reference gene:2503008999; PFAM: AICARFT/IMPCHase bienzyme.
 
 0.981
Dalk_5096
PFAM: MGS domain protein; KEGG: dol:Dole_1515 phosphoribosylaminoimidazolecarboxamide formyltransferase; IMG reference gene:2503010855; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain.
 
 0.978
Dalk_3310
PFAM: Orn/Lys/Arg decarboxylase major region; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dol:Dole_2082 glycine hydroxymethyltransferase; IMG reference gene:2503009040; PFAM: Serine hydroxymethyltransferase.
  
 0.970
Dalk_1969
TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: sfu:Sfum_1185 phosphoribosylglycinamide formyltransferase; IMG reference gene:2503007686; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent.
  
 0.951
Dalk_0681
Bifunctional CO dehydrogenase/acetyl-CoA synthase, beta subunit; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; IMG reference gene:2503006382; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
    
 0.933
Dalk_0912
KEGG: dol:Dole_2369 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; IMG reference gene:2503006613; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.
  
 
 0.915
Dalk_3288
PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dol:Dole_0482 phosphoribosylformylglycinamidine synthase; IMG reference gene:2503009018; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II.
  
 
 0.887
Dalk_4395
PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dol:Dole_2744 5-formyltetrahydrofolate cyclo-ligase; IMG reference gene:2503010143; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.
   
 0.881
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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