Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
cce_0656 | cce_1138 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.997 |
cce_0656 | cce_1185 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
cce_0656 | cce_1186 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
cce_0656 | cce_1555 | Two-component hybrid sensor and regulator. | Unknown; Contains a GAF domain. | 0.932 |
cce_0656 | cce_1777 | Two-component hybrid sensor and regulator. | Probable two-component hybrid sensor and regulator. | 0.999 |
cce_0656 | cce_2232 | Two-component hybrid sensor and regulator. | Two-component sensor histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
cce_0656 | cce_3558 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.905 |
cce_0656 | cce_3723 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.997 |
cce_0656 | cce_4288 | Two-component hybrid sensor and regulator. | Putative two-component response regulator. | 0.913 |
cce_0656 | cce_4289 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.996 |
cce_1138 | cce_0656 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.997 |
cce_1138 | cce_1185 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
cce_1138 | cce_1186 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.994 |
cce_1138 | cce_1555 | Two-component hybrid sensor and regulator. | Unknown; Contains a GAF domain. | 0.925 |
cce_1138 | cce_1777 | Two-component hybrid sensor and regulator. | Probable two-component hybrid sensor and regulator. | 0.999 |
cce_1138 | cce_2232 | Two-component hybrid sensor and regulator. | Two-component sensor histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
cce_1138 | cce_3558 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.930 |
cce_1138 | cce_3723 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.933 |
cce_1138 | cce_4288 | Two-component hybrid sensor and regulator. | Putative two-component response regulator. | 0.913 |
cce_1138 | cce_4289 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.989 |
page 1 of 6