Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAE_02160 | MAE_15190 | MAE_02160 | MAE_15190 | Probable glycosyl transferase. | Methyltransferase; FkbM family. | 0.746 |
MAE_02160 | MAE_52350 | MAE_02160 | MAE_52350 | Probable glycosyl transferase. | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.425 |
MAE_02160 | trmB | MAE_02160 | MAE_46310 | Probable glycosyl transferase. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.753 |
MAE_02160 | truA | MAE_02160 | MAE_52520 | Probable glycosyl transferase. | tRNA pseudouridine synthase 1; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.449 |
MAE_02160 | truB | MAE_02160 | MAE_28150 | Probable glycosyl transferase. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.619 |
MAE_15190 | MAE_02160 | MAE_15190 | MAE_02160 | Methyltransferase; FkbM family. | Probable glycosyl transferase. | 0.746 |
MAE_15190 | MAE_52350 | MAE_15190 | MAE_52350 | Methyltransferase; FkbM family. | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.940 |
MAE_15190 | trmB | MAE_15190 | MAE_46310 | Methyltransferase; FkbM family. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.605 |
MAE_15190 | truA | MAE_15190 | MAE_52520 | Methyltransferase; FkbM family. | tRNA pseudouridine synthase 1; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.433 |
MAE_15190 | truB | MAE_15190 | MAE_28150 | Methyltransferase; FkbM family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.638 |
MAE_46290 | MAE_46300 | MAE_46290 | MAE_46300 | Thioredoxin-related. | Hypothetical protein. | 0.773 |
MAE_46290 | MAE_46320 | MAE_46290 | MAE_46320 | Thioredoxin-related. | Metallophosphoesterase. | 0.484 |
MAE_46290 | trmB | MAE_46290 | MAE_46310 | Thioredoxin-related. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.674 |
MAE_46300 | MAE_46290 | MAE_46300 | MAE_46290 | Hypothetical protein. | Thioredoxin-related. | 0.773 |
MAE_46300 | MAE_46320 | MAE_46300 | MAE_46320 | Hypothetical protein. | Metallophosphoesterase. | 0.758 |
MAE_46300 | trmB | MAE_46300 | MAE_46310 | Hypothetical protein. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.664 |
MAE_46320 | MAE_46290 | MAE_46320 | MAE_46290 | Metallophosphoesterase. | Thioredoxin-related. | 0.484 |
MAE_46320 | MAE_46300 | MAE_46320 | MAE_46300 | Metallophosphoesterase. | Hypothetical protein. | 0.758 |
MAE_46320 | trmB | MAE_46320 | MAE_46310 | Metallophosphoesterase. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.592 |
MAE_52350 | MAE_02160 | MAE_52350 | MAE_02160 | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Probable glycosyl transferase. | 0.425 |
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