STRINGSTRING
Cwoe_3979 Cwoe_3979 Cwoe_4287 Cwoe_4287 Cwoe_3981 Cwoe_3981 Cwoe_3982 Cwoe_3982 Cwoe_3980 Cwoe_3980 Cwoe_3983 Cwoe_3983 Cwoe_3361 Cwoe_3361 Cwoe_3986 Cwoe_3986 Cwoe_3985 Cwoe_3985 Cwoe_5751 Cwoe_5751 Cwoe_4418 Cwoe_4418
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_3979PFAM: protein of unknown function DUF608; KEGG: hypothetical protein. (870 aa)    
Predicted Functional Partners:
Cwoe_4287
PFAM: Ricin B lectin; glycoside hydrolase family 30; SMART: Ricin B lectin; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 30 family.
     
 0.906
Cwoe_3981
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2313 binding-protein-dependent transport systems inner membrane component.
       0.767
Cwoe_3982
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20232 putative suagr ABC transporter permease protein.
       0.763
Cwoe_3980
Hypothetical protein; KEGG: cvi:CV_2894 endoglucanase-related protein.
       0.762
Cwoe_3983
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_2315 extracellular solute-binding protein.
       0.762
Cwoe_3361
PFAM: ubiquitin; SMART: ubiquitin; KEGG: RPS27A; ribosomal protein S27a; K02977 small subunit ribosomal protein S27Ae.
    
 0.695
Cwoe_3986
PFAM: Carbohydrate kinase, FGGY-like; KEGG: hch:HCH_02472 sugar (pentulose and hexulose) kinase; Belongs to the FGGY kinase family.
 
 
   0.641
Cwoe_3985
PFAM: L-fucose isomerase _2 domain protein; L- fucose isomerase-like-like; L-fucose isomerase _1 domain protein; KEGG: pmr:PMI2940 hypothetical protein.
 
     0.631
Cwoe_5751
PFAM: sulfatase; KEGG: dde:Dde_0462 sulfatase, putative.
  
  
  0.573
Cwoe_4418
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein.
  
  
 0.568
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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