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Namu_0584 Namu_0584 Namu_0826 Namu_0826 ku ku Namu_4586 Namu_4586 Namu_0585 Namu_0585 Namu_4395 Namu_4395 Namu_0586 Namu_0586 Namu_4566 Namu_4566 Namu_5022 Namu_5022 Namu_0210 Namu_0210
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Namu_0584TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: afw:Anae109_2830 DNA primase small subunit. (329 aa)    
Predicted Functional Partners:
Namu_0826
PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: afw:Anae109_4038 ATP-dependent DNA ligase.
   
 0.968
ku
Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
  
 0.888
Namu_4586
TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA ligase domain protein; KEGG: ank:AnaeK_4290 DNA ligase I, ATP-dependent Dnl1.
   
 0.834
Namu_0585
PFAM: NAD-dependent epimerase/dehydratase; short- chain dehydrogenase/reductase SDR; KEGG: xcv:XCV0076 hypothetical protein.
       0.686
Namu_4395
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sat:SYN_00286 DNA polymerase IV.
 
   
 0.627
Namu_0586
Hypothetical protein.
       0.494
Namu_4566
PFAM: protein of unknown function DUF72; KEGG: xcv:XCV3065 hypothetical protein.
 
    0.463
Namu_5022
KEGG: bbt:BBta_6235 hypothetical protein.
  
     0.450
Namu_0210
DNA-(apurinic or apyrimidinic site) lyase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: hch:HCH_02013 formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
 
     0.441
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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