STRINGSTRING
Elen_1344 Elen_1344 Elen_0281 Elen_0281 Elen_1345 Elen_1345 Elen_1310 Elen_1310 Elen_1343 Elen_1343 Elen_0189 Elen_0189 Elen_0467 Elen_0467 Elen_1925 Elen_1925 Elen_2229 Elen_2229 Elen_1086 Elen_1086 Elen_2577 Elen_2577
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1344KEGG: swd:Swoo_2978 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal- dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: GGDEF domain containing protein; metal- dependent phosphohydrolase HD region; response regulator receiver. (701 aa)    
Predicted Functional Partners:
Elen_0281
Diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: dds:Ddes_1762 diguanylate cyclase/phosphodiesterase.
  
 0.981
Elen_1345
PFAM: Hpt domain protein; KEGG: vco:VC0395_A0965 sensory box sensor histidine kinase/response regulator.
 
  
 0.977
Elen_1310
Histidine kinase; KEGG: lch:Lcho_1464 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; extracellular solute-binding protein family 3.
 
 0.962
Elen_1343
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: lch:Lcho_3366 PAS/PAC sensor hybrid histidine kinase.
 
0.952
Elen_0189
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: dds:Ddes_2284 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
0.950
Elen_0467
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: dds:Ddes_2284 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein.
 
 
0.950
Elen_1925
Diguanylate cyclase; KEGG: smd:Smed_0926 response regulator PleD; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
  
0.950
Elen_2229
Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: EAL domain protein; extracellular solute- binding protein family 3; GGDEF domain containing protein; KEGG: dds:Ddes_0639 diguanylate cyclase/phosphodiesterase.
  
 0.946
Elen_1086
Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: dds:Ddes_2284 diguanylate cyclase/phosphodiesterase.
  
 0.929
Elen_2577
KEGG: diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
 0.929
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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