STRINGSTRING
Cpin_6026 Cpin_6026 Cpin_2227 Cpin_2227 Cpin_2806 Cpin_2806 Cpin_6025 Cpin_6025 Cpin_6533 Cpin_6533 Cpin_1811 Cpin_1811 Cpin_6727 Cpin_6727 Cpin_1059 Cpin_1059 Cpin_4996 Cpin_4996 Cpin_4926 Cpin_4926
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
Cpin_6026PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase. (787 aa)    
Predicted Functional Partners:
Cpin_2227
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_6247 oxidoreductase domain- containing protein.
  
     0.612
Cpin_2806
PFAM: WD40 domain protein beta Propeller; KEGG: sus:Acid_7543 periplasmic component of the Tol biopolymer transport system-like protein.
  
     0.569
Cpin_6025
PFAM: SMP-30/Gluconolaconase/LRE domain protein; Arylesterase; KEGG: bph:Bphy_5161 gluconolactonase.
 
    0.558
Cpin_6533
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein.
  
     0.483
Cpin_1811
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein.
  
     0.472
Cpin_6727
PFAM: ASPIC/UnbV domain protein; KEGG: sus:Acid_1964 ASPIC/UnbV domain-containing protein.
  
     0.456
Cpin_1059
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein.
  
     0.442
Cpin_4996
PFAM: protein of unknown function DUF1680; coagulation factor 5/8 type domain protein; KEGG: sus:Acid_3381 hypothetical protein.
 
   
 0.424
Cpin_4926
PFAM: RhaT l-rhamnose-proton symport 2; KEGG: sus:Acid_5934 rhamnose-proton symporter.
 
     0.420
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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