Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aflv_0328 | Aflv_0495 | Aflv_0328 | Aflv_0495 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malic enzyme. | 0.954 |
Aflv_0328 | Aflv_2045 | Aflv_0328 | Aflv_2045 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malic enzyme. | 0.954 |
Aflv_0328 | aspB | Aflv_0328 | Aflv_1133 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Aspartate aminotransferase. | 0.809 |
Aflv_0328 | citZ | Aflv_0328 | Aflv_0504 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.972 |
Aflv_0328 | glcB | Aflv_0328 | Aflv_1570 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.937 |
Aflv_0328 | icd | Aflv_0328 | Aflv_0505 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Isocitrate dehydrogenase. | 0.980 |
Aflv_0328 | mdh | Aflv_0328 | Aflv_0506 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.989 |
Aflv_0328 | mqo | Aflv_0328 | Aflv_1651 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate/quinone oxidoreductase. | 0.938 |
Aflv_0328 | pckA | Aflv_0328 | Aflv_0413 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.530 |
Aflv_0328 | pycA | Aflv_0328 | Aflv_1871 | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.508 |
Aflv_0495 | Aflv_0328 | Aflv_0495 | Aflv_0328 | Malic enzyme. | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.954 |
Aflv_0495 | Aflv_2045 | Aflv_0495 | Aflv_2045 | Malic enzyme. | Malic enzyme. | 0.903 |
Aflv_0495 | citZ | Aflv_0495 | Aflv_0504 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.853 |
Aflv_0495 | glcB | Aflv_0495 | Aflv_1570 | Malic enzyme. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.917 |
Aflv_0495 | mdh | Aflv_0495 | Aflv_0506 | Malic enzyme. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.930 |
Aflv_0495 | mqo | Aflv_0495 | Aflv_1651 | Malic enzyme. | Malate/quinone oxidoreductase. | 0.915 |
Aflv_0495 | pckA | Aflv_0495 | Aflv_0413 | Malic enzyme. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.427 |
Aflv_0495 | pycA | Aflv_0495 | Aflv_1871 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.928 |
Aflv_2045 | Aflv_0328 | Aflv_2045 | Aflv_0328 | Malic enzyme. | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.954 |
Aflv_2045 | Aflv_0495 | Aflv_2045 | Aflv_0495 | Malic enzyme. | Malic enzyme. | 0.903 |
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