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CJA_2640 CJA_2640 CJA_2641 CJA_2641 CJA_1718 CJA_1718 CJA_1190 CJA_1190 CJA_2461 CJA_2461 CJA_1720 CJA_1720 gacS gacS CJA_1719 CJA_1719 CJA_1331 CJA_1331 CJA_3654 CJA_3654 CJA_0314 CJA_0314
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CJA_2640Putative response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. (581 aa)    
Predicted Functional Partners:
CJA_2641
Identified by match to protein family HMM PF01740.
 
 0.998
CJA_1718
Conserved hypothetical protein; Identified by similarity to GB:AAG06735.1.
 
 0.997
CJA_1190
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.981
CJA_2461
Probable sensor/response hybrid; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.973
CJA_1720
Hpt domain protein; Identified by match to protein family HMM PF01627.
 
 0.971
gacS
GacS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.939
CJA_1719
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518; match to protein family HMM PF07228.
 
0.936
CJA_1331
Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 
 0.929
CJA_3654
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.910
CJA_0314
Sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
  
 0.908
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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