STRINGSTRING
Pc13g09370 Pc13g09370 fen1 fen1 Pc16g09710 Pc16g09710 Pc16g09720 Pc16g09720 Pc16g13010 Pc16g13010 Pc21g18980 Pc21g18980 Pc20g07200 Pc20g07200 Pc12g15980 Pc12g15980 Pc18g01820 Pc18g01820 Pc20g07790 Pc20g07790 Pc22g15510 Pc22g15510
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g09370DNA ligase. (833 aa)    
Predicted Functional Partners:
fen1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
  
 0.955
Pc16g09710
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.914
Pc16g09720
Pc16g09720 protein.
   
 0.914
Pc16g13010
DNA ligase.
  
  
 
0.907
Pc21g18980
DNA polymerase.
   
 0.874
Pc20g07200
Pc20g07200 protein.
   
 0.870
Pc12g15980
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.853
Pc18g01820
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 0.817
Pc20g07790
Pc20g07790 protein.
  
 
 0.807
Pc22g15510
Pc22g15510 protein.
   
 0.806
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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