STRINGSTRING
Hoch_6749 Hoch_6749 Hoch_4556 Hoch_4556 panC panC Hoch_6714 Hoch_6714 Hoch_0564 Hoch_0564 Hoch_0264 Hoch_0264 Hoch_4024 Hoch_4024 Hoch_4575 Hoch_4575 Hoch_6202 Hoch_6202 Hoch_0109 Hoch_0109 Hoch_2255 Hoch_2255
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Hoch_6749PFAM: Pyridoxal-dependent decarboxylase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1644 pyridoxal-dependent decarboxylase. (574 aa)    
Predicted Functional Partners:
Hoch_4556
PFAM: Aldehyde Dehydrogenase; aminotransferase class-III; KEGG: bba:Bd0131 succinylglutamic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.931
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.930
Hoch_6714
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: mxa:MXAN_3917 glutamate synthase, large subunit.
    
 0.928
Hoch_0564
Acetylornithine transaminase; PFAM: aminotransferase class-III; KEGG: sat:SYN_01215 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.925
Hoch_0264
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: dat:HRM2_16880 PutA2; Belongs to the aldehyde dehydrogenase family.
   
 0.907
Hoch_4024
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: hch:HCH_00731 glutamine synthetase.
  
 
 0.905
Hoch_4575
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ank:AnaeK_4385 glutamine synthetase, type I.
  
 
 0.905
Hoch_6202
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_0838 taurine dioxygenase.
  
 
 0.905
Hoch_0109
Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: pag:PLES_49711 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.904
Hoch_2255
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: scl:sce6195 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.904
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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