STRINGSTRING
Cseg_1225 Cseg_1225 gshB gshB Cseg_1970 Cseg_1970 Cseg_2951 Cseg_2951 Cseg_0411 Cseg_0411 Cseg_0296 Cseg_0296 rpoA rpoA Cseg_1224 Cseg_1224 Cseg_0125 Cseg_0125 rpoC rpoC rpoH rpoH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1225PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_3437 glutathione S-transferase domain-containing protein. (209 aa)    
Predicted Functional Partners:
gshB
TIGRFAM: glutathione synthetase; KEGG: ccs:CCNA_00140 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
 
  
 0.921
Cseg_1970
Peroxiredoxin; KEGG: ccs:CCNA_01804 glutathione peroxidase; PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.917
Cseg_2951
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
    
 0.917
Cseg_0411
TIGRFAM: gamma-glutamyltransferase; KEGG: ccs:CCNA_00565 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
     
 0.904
Cseg_0296
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 
 0.901
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.595
Cseg_1224
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02570 transporter.
       0.550
Cseg_0125
KEGG: cak:Caul_0203 hypothetical protein.
   
 0.546
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.484
rpoH
RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
 
 
 
 0.466
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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