STRINGSTRING
yaaI yaaI yaaW yaaW satP satP insL1 insL1 yaaU yaaU fixX fixX caiA caiA insB1 insB1 caiD caiD fixC fixC fixB fixB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaaIUPF0412 family protein; Belongs to the UPF0412 family. (134 aa)    
Predicted Functional Partners:
yaaW
UPF0174 family protein; Belongs to the UPF0174 family.
  
  
 0.949
satP
Succinate-acetate transporter; Uptake of acetate and succinate. Transport is energetically dependent on the protonmotive force.
  
  
 0.788
insL1
IS186 transposase; Involved in the transposition of the insertion sequence IS186.
     
 0.661
yaaU
Putative MFS sugar transporter; Putative transport protein.
   
  
 0.621
fixX
Putative 4Fe-4S ferredoxin-type protein; Could be part of an electron transfer system required for anaerobic carnitine reduction. Could be a 3Fe-4S cluster-containing protein; Belongs to the bacterial-type ferredoxin family. FixX subfamily.
   
  
 0.594
caiA
Crotonobetaine reductase subunit II, FAD-binding; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA. The electron donor could be the FixA/FixB complex.
   
  
 0.582
insB1
IS1 transposase B; Absolutely required for transposition of IS1.
      
 0.544
caiD
carnitinyl-CoA dehydratase; Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA.
   
  
 0.541
fixC
Putative oxidoreductase; Could be part of an electron transfer system required for anaerobic carnitine reduction; Belongs to the ETF-QO/FixC family.
   
  
 0.533
fixB
Protein FixB; Required for anaerobic carnitine reduction. May bring reductant to CaiA; Belongs to the ETF alpha-subunit/FixB family.
   
  
 0.517
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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