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pinQ pinQ ydfK ydfK tfaQ tfaQ ybfD ybfD tfaR tfaR ynaE ynaE pinR pinR yhhI yhhI ldrC ldrC rzoR rzoR ldrA ldrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pinQQin prophage; putative site-specific recombinase; Belongs to the site-specific recombinase resolvase family. (196 aa)    
Predicted Functional Partners:
ydfK
Cold shock protein YdfK; Cryptic prophage Qin/Kim.
  
  
 0.914
tfaQ
Qin prophage; Tail fiber assembly protein homolog from lambdoid prophage Qin; Belongs to the tfa family.
   
  
 0.843
ybfD
H repeat-associated putative transposase YbfD; Pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein; Belongs to the transposase 11 family.
  
  
 0.840
tfaR
Rac prophage; Tail fiber assembly protein homolog from lambdoid prophage Rac; Belongs to the tfa family.
   
  
 0.839
ynaE
Cold shock protein, Rac prophage.
   
  
 0.815
pinR
Rac prophage; putative site-specific recombinase.
  
 
0.796
yhhI
H repeat-associated putative transposase YhhI; Pseudogene fragment; Belongs to the transposase 11 family.
  
   
 0.770
ldrC
Small toxic polypeptide.
      
 0.738
rzoR
Prophage outer membrane lipoprotein RzoR; Component of the spanin complex that disrupts the outer membrane and causes cell lysis during virus exit. The spanin complex conducts the final step in cell lysis by disrupting the outer membrane after holin and endolysin action have permeabilized the inner membrane and degraded the host peptidoglycans (By similarity).
      
 0.730
ldrA
Toxic polypeptide, small; Toxic component of a type I toxin-antitoxin (TA) system. Inhibits ATP synthesis possibly due to its insertion in the cell inner membrane, ATP levels drop over 50% 2 minutes after induction. Overexpression is toxic leading to cell death, it inhibits cell growth within 30 minutes; C-terminally tagged versions of the protein are toxic while N-terminally tagged versions are not.
      
 0.645
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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