Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yaaW | ydhS | b0011 | b1668 | UPF0174 family protein; Belongs to the UPF0174 family. | Putative oxidoreductase. | 0.644 |
yaaW | yegV | b0011 | b2100 | UPF0174 family protein; Belongs to the UPF0174 family. | Putative kinase; Belongs to the carbohydrate kinase PfkB family. | 0.805 |
yaaW | yfcH | b0011 | b2304 | UPF0174 family protein; Belongs to the UPF0174 family. | Putative sugar nucleotide epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily. | 0.815 |
ybhP | ydhS | b0790 | b1668 | Endo/exonuclease/phosphatase family protein; Protein involved in DNA catabolic process. | Putative oxidoreductase. | 0.703 |
ybhP | yfcG | b0790 | b2302 | Endo/exonuclease/phosphatase family protein; Protein involved in DNA catabolic process. | GSH-dependent disulfide bond oxidoreductase; Exhibits a very robust glutathione (GSH)-dependent disulfide- bond reductase activity toward the model substrate, 2-hydroxyethyl disulfide; the actual physiological substrates are not known. Has also a low GSH-dependent hydroperoxidase activity toward cumene hydroperoxide, but does not reduce H(2)O(2), tert-butyl hydroperoxide, benzyl peroxide, or lauroyl peroxide. Exhibits little or no GSH transferase activity with most typical electrophilic substrates, and has no detectable transferase activity using glutathionylspermidine (GspSH) as the n [...] | 0.810 |
ydaE | ydhS | b4526 | b1668 | Conserved protein, Rac prophage. | Putative oxidoreductase. | 0.875 |
ydaE | yeaX | b4526 | b1803 | Conserved protein, Rac prophage. | Putative YeaWX dioxygenase beta subunit, reductase component; Converts carnitine to trimethylamine and malic semialdehyde. Can also use gamma-butyrobetaine, choline and betaine as substrates. | 0.731 |
ydcK | ydhS | b1428 | b1668 | Uncharacterized protein; Putative enzyme; Not classified; Belongs to the transferase hexapeptide repeat family. | Putative oxidoreductase. | 0.646 |
ydhS | yaaW | b1668 | b0011 | Putative oxidoreductase. | UPF0174 family protein; Belongs to the UPF0174 family. | 0.644 |
ydhS | ybhP | b1668 | b0790 | Putative oxidoreductase. | Endo/exonuclease/phosphatase family protein; Protein involved in DNA catabolic process. | 0.703 |
ydhS | ydaE | b1668 | b4526 | Putative oxidoreductase. | Conserved protein, Rac prophage. | 0.875 |
ydhS | ydcK | b1668 | b1428 | Putative oxidoreductase. | Uncharacterized protein; Putative enzyme; Not classified; Belongs to the transferase hexapeptide repeat family. | 0.646 |
ydhS | yeaX | b1668 | b1803 | Putative oxidoreductase. | Putative YeaWX dioxygenase beta subunit, reductase component; Converts carnitine to trimethylamine and malic semialdehyde. Can also use gamma-butyrobetaine, choline and betaine as substrates. | 0.681 |
ydhS | yeeE | b1668 | b2013 | Putative oxidoreductase. | UPF0394 family inner membrane protein; Putative transport system permease protein. | 0.641 |
ydhS | yegV | b1668 | b2100 | Putative oxidoreductase. | Putative kinase; Belongs to the carbohydrate kinase PfkB family. | 0.804 |
ydhS | yfcG | b1668 | b2302 | Putative oxidoreductase. | GSH-dependent disulfide bond oxidoreductase; Exhibits a very robust glutathione (GSH)-dependent disulfide- bond reductase activity toward the model substrate, 2-hydroxyethyl disulfide; the actual physiological substrates are not known. Has also a low GSH-dependent hydroperoxidase activity toward cumene hydroperoxide, but does not reduce H(2)O(2), tert-butyl hydroperoxide, benzyl peroxide, or lauroyl peroxide. Exhibits little or no GSH transferase activity with most typical electrophilic substrates, and has no detectable transferase activity using glutathionylspermidine (GspSH) as the n [...] | 0.681 |
ydhS | yfcH | b1668 | b2304 | Putative oxidoreductase. | Putative sugar nucleotide epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily. | 0.809 |
ydhS | ynjC | b1668 | b1755 | Putative oxidoreductase. | Putative ABC transporter permease; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane. | 0.722 |
yeaX | ydaE | b1803 | b4526 | Putative YeaWX dioxygenase beta subunit, reductase component; Converts carnitine to trimethylamine and malic semialdehyde. Can also use gamma-butyrobetaine, choline and betaine as substrates. | Conserved protein, Rac prophage. | 0.731 |
yeaX | ydhS | b1803 | b1668 | Putative YeaWX dioxygenase beta subunit, reductase component; Converts carnitine to trimethylamine and malic semialdehyde. Can also use gamma-butyrobetaine, choline and betaine as substrates. | Putative oxidoreductase. | 0.681 |
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