STRINGSTRING
ydhV ydhV ydhW ydhW ydhY ydhY ydhX ydhX ydhU ydhU ydhT ydhT hybA hybA nrfC nrfC ynfG ynfG yddA yddA dmsB dmsB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ydhVPutative oxidoreductase subunit. (700 aa)    
Predicted Functional Partners:
ydhW
FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex.
  
  
 0.989
ydhY
Putative 4Fe-4S ferridoxin-type protein; Putative oxidoreductase, Fe-S subunit.
 
 
 0.984
ydhX
Putative 4Fe-4S ferridoxin-type protein; Putative oxidoreductase, Fe-S subunit.
 
 
 0.924
ydhU
Putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex.
 
    0.826
ydhT
FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex.
  
    0.617
hybA
Hydrogenase 2 4Fe-4S ferredoxin-type component; Participates in the periplasmic electron-transferring activity of hydrogenase 2 during its catalytic turnover.
 
 
 0.607
nrfC
Formate-dependent nitrite reductase, 4Fe4S subunit; Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes.
 
 
 0.572
ynfG
Oxidoreductase, Fe-S subunit; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds.
 
 
 0.563
yddA
Putative multidrug ABC transporter permease/ATPase.
  
   
 0.562
dmsB
Dimethyl sulfoxide reductase, anaerobic, subunit B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds.
 
 
 0.561
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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