Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ybdN | ybdO | b0602 | b0603 | PAPS reductase-like domain protein. | Putative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. | 0.774 |
ybdN | yejG | b0602 | b2181 | PAPS reductase-like domain protein. | Uncharacterized protein. | 0.644 |
ybdN | yjtD | b0602 | b4403 | PAPS reductase-like domain protein. | Putative methyltransferase; Protein involved in RNA modification; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.731 |
ybdO | ybdN | b0603 | b0602 | Putative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. | PAPS reductase-like domain protein. | 0.774 |
ybdO | yejG | b0603 | b2181 | Putative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.570 |
ybdO | yjtD | b0603 | b4403 | Putative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. | Putative methyltransferase; Protein involved in RNA modification; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.499 |
ybjM | yejG | b0848 | b2181 | Inner membrane protein. | Uncharacterized protein. | 0.523 |
ybjM | yhcF | b0848 | b3219 | Inner membrane protein. | Putative transcriptional regulator; Protein involved in transcription and regulation of transcription, DNA-dependent; To E.coli GltF. | 0.522 |
ybjM | yigE | b0848 | b4482 | Inner membrane protein. | DUF2233 family protein. | 0.543 |
ydcT | yejG | b1441 | b2181 | Putative ABC transporter ATPase; Probably part of the ABC transporter complex YdcSTUV. Probably responsible for energy coupling to the transport system. | Uncharacterized protein. | 0.506 |
yegI | yejG | b2070 | b2181 | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | Uncharacterized protein. | 0.504 |
yejG | ybdN | b2181 | b0602 | Uncharacterized protein. | PAPS reductase-like domain protein. | 0.644 |
yejG | ybdO | b2181 | b0603 | Uncharacterized protein. | Putative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. | 0.570 |
yejG | ybjM | b2181 | b0848 | Uncharacterized protein. | Inner membrane protein. | 0.523 |
yejG | ydcT | b2181 | b1441 | Uncharacterized protein. | Putative ABC transporter ATPase; Probably part of the ABC transporter complex YdcSTUV. Probably responsible for energy coupling to the transport system. | 0.506 |
yejG | yegI | b2181 | b2070 | Uncharacterized protein. | Protein kinase-related putative non-specific DNA-binding protein; Probable serine/threonine kinase. | 0.504 |
yejG | ygaV | b2181 | b2667 | Uncharacterized protein. | Tributyltin-inducible repressor of ygaVP; Functions as transcription repressor. | 0.644 |
yejG | yhcC | b2181 | b3211 | Uncharacterized protein. | Putative Fe-S oxidoreductase, Radical SAM superfamily protein; In vitro, can cleave S-adenosyl-L-methionine into methionine and 5'-deoxyadenosine (AdoH); Belongs to the radical SAM superfamily. | 0.539 |
yejG | yhcF | b2181 | b3219 | Uncharacterized protein. | Putative transcriptional regulator; Protein involved in transcription and regulation of transcription, DNA-dependent; To E.coli GltF. | 0.530 |
yejG | yigE | b2181 | b4482 | Uncharacterized protein. | DUF2233 family protein. | 0.622 |
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