Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
insC1-2 | insC1-5 | b1403 | b3044 | IS2 repressor TnpA. | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | 0.738 |
insC1-2 | insD1 | b1403 | b0361 | IS2 repressor TnpA. | IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2. | 0.981 |
insC1-2 | insD1-2 | b1403 | b1402 | IS2 repressor TnpA. | Pseudogene, autotransporter homolog; interrupted by IS2 and IS30. | 0.992 |
insC1-2 | insD1-3 | b1403 | b1996 | IS2 repressor TnpA. | CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion. | 0.927 |
insC1-2 | insD1-4 | b1403 | b2860 | IS2 repressor TnpA. | Pseudogene, orgA family, part of T3SS PAI ETT2 remnant. | 0.965 |
insC1-2 | insD1-5 | b1403 | b3045 | IS2 repressor TnpA. | IS2 transposase TnpB. | 0.978 |
insC1-2 | insD1-6 | b1403 | b4273 | IS2 repressor TnpA. | IS2 transposase TnpB. | 0.976 |
insC1-2 | insI1-3 | b1403 | b4284 | IS2 repressor TnpA. | Pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related. | 0.735 |
insC1-2 | ynbC | b1403 | b1410 | IS2 repressor TnpA. | Putative esterase. | 0.645 |
insC1-5 | insC1-2 | b3044 | b1403 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | IS2 repressor TnpA. | 0.738 |
insC1-5 | insD1 | b3044 | b0361 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2. | 0.946 |
insC1-5 | insD1-2 | b3044 | b1402 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | Pseudogene, autotransporter homolog; interrupted by IS2 and IS30. | 0.963 |
insC1-5 | insD1-3 | b3044 | b1996 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion. | 0.925 |
insC1-5 | insD1-4 | b3044 | b2860 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | Pseudogene, orgA family, part of T3SS PAI ETT2 remnant. | 0.970 |
insC1-5 | insD1-5 | b3044 | b3045 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | IS2 transposase TnpB. | 0.988 |
insC1-5 | insD1-6 | b3044 | b4273 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | IS2 transposase TnpB. | 0.937 |
insC1-5 | insI1-3 | b3044 | b4284 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | Pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related. | 0.786 |
insC1-5 | ynbC | b3044 | b1410 | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | Putative esterase. | 0.734 |
insC1-6 | insD1 | b4272 | b0361 | Pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase. | IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2. | 0.939 |
insC1-6 | insD1-2 | b4272 | b1402 | Pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase. | Pseudogene, autotransporter homolog; interrupted by IS2 and IS30. | 0.957 |
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