STRINGSTRING
ibsE ibsE ibsA ibsA ibsB ibsB ibsD ibsD ibsC ibsC yfhL yfhL shoB shoB acpS acpS yicC yicC yqiK yqiK yegL yegL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ibsEToxic membrane protein. (19 aa)    
Predicted Functional Partners:
ibsA
Toxic membrane protein.
      
 0.896
ibsB
Toxic membrane protein.
      
 0.891
ibsD
Toxic membrane protein.
     
 0.882
ibsC
Toxic membrane protein.
      
 0.816
yfhL
Putative 4Fe-4S cluster-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
      
 0.788
shoB
Toxic membrane protein; Toxic component of a type I toxin-antitoxin (TA) system. May be a toxic protein; overexpression causes cessation of growth and rapid membrane depolarization. Overexpression induces stress-response and a number of membrane protein genes.
      
 0.544
acpS
Holo-[acyl-carrier-protein] synthase 1; Transfers the 4'-phosphopantetheine moiety from coenzyme A to the 'Ser-36' of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
      
 0.522
yicC
UPF0701 protein YicC; Ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH; Protein involved in RNA catabolic process.
      
 0.479
yqiK
PHB family membrane protein, function unknown; Putative membrane protein.
     
 0.475
yegL
VMA domain protein.
      
 0.459
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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