node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dtur_1434 | Dtur_1437 | Dtur_1434 | Dtur_1437 | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.899 |
Dtur_1434 | def | Dtur_1434 | Dtur_1440 | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.815 |
Dtur_1434 | fmt | Dtur_1434 | Dtur_1439 | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.832 |
Dtur_1434 | rlmN | Dtur_1434 | Dtur_1436 | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.798 |
Dtur_1437 | Dtur_1434 | Dtur_1437 | Dtur_1434 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.899 |
Dtur_1437 | def | Dtur_1437 | Dtur_1440 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.879 |
Dtur_1437 | fmt | Dtur_1437 | Dtur_1439 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.999 |
Dtur_1437 | rlmN | Dtur_1437 | Dtur_1436 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.994 |
Dtur_1437 | rplJ | Dtur_1437 | Dtur_1372 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.872 |
Dtur_1437 | rplM | Dtur_1437 | Dtur_1014 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.886 |
Dtur_1437 | rplX | Dtur_1437 | Dtur_0992 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.904 |
Dtur_1437 | rpoB | Dtur_1437 | Dtur_0974 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.867 |
Dtur_1437 | rpsJ | Dtur_1437 | Dtur_0980 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.941 |
Dtur_1437 | truB | Dtur_1437 | Dtur_1212 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.891 |
def | Dtur_1434 | Dtur_1440 | Dtur_1434 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.815 |
def | Dtur_1437 | Dtur_1440 | Dtur_1437 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.879 |
def | fmt | Dtur_1440 | Dtur_1439 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.994 |
def | rlmN | Dtur_1440 | Dtur_1436 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.797 |
def | rplM | Dtur_1440 | Dtur_1014 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.909 |
def | rplX | Dtur_1440 | Dtur_0992 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.919 |