STRINGSTRING
bamC bamC bamE bamE bamA bamA Fbal_2812 Fbal_2812 Fbal_0938 Fbal_0938 bamD bamD bamB bamB dapA dapA Fbal_2148 Fbal_2148 lptE lptE Fbal_1519 Fbal_1519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bamCNlpBDapX family lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (365 aa)    
Predicted Functional Partners:
bamE
SmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.950
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.937
Fbal_2812
KEGG: swd:Swoo_3461 hypothetical protein; SPTR: A2UVF3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3192).
  
 
 0.929
Fbal_0938
KEGG: spl:Spea_2898 hypothetical protein; SPTR: A2UVK1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3192).
  
 
 0.912
bamD
Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.905
bamB
Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.875
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.823
Fbal_2148
KEGG: sfr:Sfri_3581 putative lipoprotein; SPTR: A3WJK3 Putative lipoprotein.
  
 
 0.802
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
  
 0.788
Fbal_1519
KEGG: vfm:VFMJ11_2485 glyceraldehyde 3-phosphate dehydrogenase; SPTR: A3UM45 Glyceraldehyde 3-phosphate dehydrogenase; PFAM: Surface antigen.
  
 
 0.788
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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