STRINGSTRING
ACT06995.1 ACT06995.1 ACT08124.1 ACT08124.1 ACT05962.1 ACT05962.1 ACT05961.1 ACT05961.1 ACT05163.1 ACT05163.1 ACT05963.1 ACT05963.1 ACT05699.1 ACT05699.1 ACT07469.1 ACT07469.1 ACT05162.1 ACT05162.1 ACT07346.1 ACT07346.1 argE argE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT06995.1PFAM: Rhamnogalacturonate lyase; KEGG: eca:ECA0804 rhamnogalacturonate lyase. (605 aa)    
Predicted Functional Partners:
ACT08124.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA1499 pectin lyase.
  
   
 0.586
ACT05962.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xca:xccb100_3711 exported pectate lyase.
  
   
 0.582
ACT05961.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xcb:XC_3590 pectate lyase.
  
   
 0.556
ACT05163.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III.
  
   
 0.532
ACT05963.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xcc:XCC0645 pectate lyase.
  
   
 0.532
ACT05699.1
PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein.
  
   
 0.519
ACT07469.1
KEGG: eca:ECA4303 hypothetical protein.
  
     0.506
ACT05162.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III.
  
   
 0.481
ACT07346.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
      
 0.472
argE
KEGG: eca:ECA0191 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein.
      
 0.464
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.