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Hden_1373 Hden_1373 Hden_2549 Hden_2549 Hden_2527 Hden_2527 Hden_1372 Hden_1372 Hden_2528 Hden_2528 Hden_3515 Hden_3515 Hden_2477 Hden_2477 Hden_1374 Hden_1374 Hden_0591 Hden_0591 Hden_2907 Hden_2907 Hden_1358 Hden_1358
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Hden_1373PFAM: superoxide dismutase copper/zinc binding; KEGG: dds:Ddes_0538 superoxide dismutase copper/zinc binding. (178 aa)    
Predicted Functional Partners:
Hden_2549
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.842
Hden_2527
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.823
Hden_1372
KEGG: rpb:RPB_4114 hypothetical protein.
       0.773
Hden_2528
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.763
Hden_3515
PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 hypothetical protein.
    
   0.747
Hden_2477
KEGG: mno:Mnod_1815 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein.
 
 
 0.707
Hden_1374
Hypothetical protein; KEGG: sus:Acid_1393 fis family transcriptional regulator.
       0.682
Hden_0591
TIGRFAM: nitrite reductase, copper-containing; KEGG: oca:OCAR_7249 copper-containing nitrite reductase; PFAM: multicopper oxidase type 3; Belongs to the multicopper oxidase family.
    
 
 0.672
Hden_2907
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
 
 0.554
Hden_1358
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.506
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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