STRINGSTRING
Celf_2983 Celf_2983 Celf_2982 Celf_2982 Celf_0080 Celf_0080 Celf_3161 Celf_3161 Celf_3081 Celf_3081 Celf_3618 Celf_3618 Celf_2984 Celf_2984 Celf_2981 Celf_2981 Celf_2985 Celf_2985 Celf_2986 Celf_2986 Celf_2792 Celf_2792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
Celf_2983PFAM: glycoside hydrolase family 3 domain protein; KEGG: hso:HS_1600 beta-hexosamidase A. (564 aa)    
Predicted Functional Partners:
Celf_2982
KEGG: cpy:Cphy_1021 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
      0.975
Celf_0080
PFAM: glycoside hydrolase family 3 domain protein; KEGG: ade:Adeh_4264 glycoside hydrolase family protein.
  
  
 
0.928
Celf_3161
KEGG: saq:Sare_3485 chitinase; PFAM: glycoside hydrolase family 18; cellulose-binding family II; SMART: chitinase II; cellulose-binding family II; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.911
Celf_3081
PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: beta-N-acetylhexosaminidase.
    
 0.906
Celf_3618
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase.
 
      0.899
Celf_2984
PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.853
Celf_2981
Transcriptional regulator, AraC family; PFAM: glycoside hydrolase family 39; helix-turn-helix- domain containing protein AraC type; KEGG: cbk:CLL_A0691 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain.
 
     0.731
Celf_2985
Hypothetical protein; KEGG: bha:BH2323 sugar ABC transporter (sugar-binding protein).
       0.671
Celf_2986
PFAM: inner-membrane translocator; KEGG: mlb:MLBr_00397 putative transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.612
Celf_2792
KEGG: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.570
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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