node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TGAM_0614 | TGAM_0905 | TGAM_0614 | TGAM_0905 | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | 0.434 |
TGAM_0614 | cca | TGAM_0614 | TGAM_0419 | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.553 |
TGAM_0614 | dnaG | TGAM_0614 | TGAM_1776 | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | Primase-related protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.432 |
TGAM_0614 | endA | TGAM_0614 | TGAM_2056 | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | tRNA-splicing endonuclease (endA); Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.546 |
TGAM_0905 | TGAM_0614 | TGAM_0905 | TGAM_0614 | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | 0.434 |
TGAM_0905 | TGAM_1760 | TGAM_0905 | TGAM_1760 | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | Replication factor A complex, RPA41 subunit; Subunit of the RPA hetero-oligomeric complex. | 0.425 |
TGAM_0905 | cca | TGAM_0905 | TGAM_0419 | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.678 |
TGAM_0905 | dnaG | TGAM_0905 | TGAM_1776 | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | Primase-related protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.743 |
TGAM_0905 | endA | TGAM_0905 | TGAM_2056 | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | tRNA-splicing endonuclease (endA); Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.588 |
TGAM_1760 | TGAM_0905 | TGAM_1760 | TGAM_0905 | Replication factor A complex, RPA41 subunit; Subunit of the RPA hetero-oligomeric complex. | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | 0.425 |
TGAM_1760 | endA | TGAM_1760 | TGAM_2056 | Replication factor A complex, RPA41 subunit; Subunit of the RPA hetero-oligomeric complex. | tRNA-splicing endonuclease (endA); Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.661 |
TGAM_2057 | endA | TGAM_2057 | TGAM_2056 | Hypothetical protein; 3 probable transmembrane helices predicted by modhmm. | tRNA-splicing endonuclease (endA); Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.773 |
TGAM_2057 | fecD-2 | TGAM_2057 | TGAM_2054 | Hypothetical protein; 3 probable transmembrane helices predicted by modhmm. | Iron(III) dicitrate transport system permease protein (fecD); 8 probable transmembrane helices predicted by modhmm. | 0.522 |
TGAM_2057 | fecE-2 | TGAM_2057 | TGAM_2053 | Hypothetical protein; 3 probable transmembrane helices predicted by modhmm. | Iron(III) dicitrate ABC transporter, ATP-binding protein (fecE). | 0.522 |
TGAM_2057 | rimI | TGAM_2057 | TGAM_2055 | Hypothetical protein; 3 probable transmembrane helices predicted by modhmm. | Ribosomal-protein-alanine acetyltransferase (rimI). | 0.773 |
cca | TGAM_0614 | TGAM_0419 | TGAM_0614 | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | 0.553 |
cca | TGAM_0905 | TGAM_0419 | TGAM_0905 | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | Conserved hypothetical protein; Belongs to DUF655 family; Contains DNA polymerase beta, N-terminal-like domain. | 0.678 |
cca | dnaG | TGAM_0419 | TGAM_1776 | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | Primase-related protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.630 |
cca | endA | TGAM_0419 | TGAM_2056 | tRNA nucleotidyltransferase (CCA adding enzyme) (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | tRNA-splicing endonuclease (endA); Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.636 |
dnaG | TGAM_0614 | TGAM_1776 | TGAM_0614 | Primase-related protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | Conserved hypothetical protein; Belongs to DUF112 family; 9 probable transmembrane helices predicted by modhmm. | 0.432 |