STRINGSTRING
xylA xylA xylB xylB xylB-2 xylB-2 ADN58791.1 ADN58791.1 ADN58770.1 ADN58770.1 ADN58776.1 ADN58776.1 ADN56177.1 ADN56177.1 ADN59767.1 ADN59767.1 ADN58934.1 ADN58934.1 ADN60358.1 ADN60358.1 ADN60360.1 ADN60360.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylATIGRFAM: xylose isomerase; KEGG: bxe:Bxe_B2622 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family. (440 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: bpy:Bphyt_3239 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
 
 0.984
xylB-2
Xylulokinase; KEGG: bph:Bphy_1198 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
 
 0.982
ADN58791.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: bxe:Bxe_A0712 putative sugar kinase protein.
 
 
 0.979
ADN58770.1
Xylulokinase; KEGG: bpy:Bphyt_3232 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; Belongs to the FGGY kinase family.
 
 
 0.964
ADN58776.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bxe:Bxe_A0730 putative D-arabinitol 4-dehydrogenase.
 
  
 0.927
ADN56177.1
PFAM: PfkB domain protein; KEGG: bxe:Bxe_A4286 putative carbohydrate kinase.
    
 0.916
ADN59767.1
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase GroES domain protein.
     
 0.908
ADN58934.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR.
     
 0.902
ADN60358.1
KEGG: bpy:Bphyt_6632 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.871
ADN60360.1
KEGG: bpy:Bphyt_6634 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
   
 0.846
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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