Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0918 | ABC2723 | ABC0918 | ABC2723 | Malic enzyme. | Malic enzyme. | 0.902 |
ABC0918 | citA | ABC0918 | ABC4043 | Malic enzyme. | Citrate synthase I; Belongs to the citrate synthase family. | 0.838 |
ABC0918 | citG | ABC0918 | ABC1746 | Malic enzyme. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.944 |
ABC0918 | citZ | ABC0918 | ABC2715 | Malic enzyme. | Citrate synthase II; Belongs to the citrate synthase family. | 0.838 |
ABC0918 | glcB | ABC0918 | ABC2174 | Malic enzyme. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.921 |
ABC0918 | mdh | ABC0918 | ABC2713 | Malic enzyme. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.968 |
ABC0918 | mmgD | ABC0918 | ABC1805 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
ABC0918 | pckA | ABC0918 | ABC2879 | Malic enzyme. | Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.441 |
ABC0918 | pycA | ABC0918 | ABC2395 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.932 |
ABC2723 | ABC0918 | ABC2723 | ABC0918 | Malic enzyme. | Malic enzyme. | 0.902 |
ABC2723 | citA | ABC2723 | ABC4043 | Malic enzyme. | Citrate synthase I; Belongs to the citrate synthase family. | 0.838 |
ABC2723 | citC | ABC2723 | ABC2714 | Malic enzyme. | Isocitrate dehydrogenase [NADP]. | 0.408 |
ABC2723 | citG | ABC2723 | ABC1746 | Malic enzyme. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.944 |
ABC2723 | citZ | ABC2723 | ABC2715 | Malic enzyme. | Citrate synthase II; Belongs to the citrate synthase family. | 0.862 |
ABC2723 | glcB | ABC2723 | ABC2174 | Malic enzyme. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.921 |
ABC2723 | mdh | ABC2723 | ABC2713 | Malic enzyme. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.972 |
ABC2723 | mmgD | ABC2723 | ABC1805 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
ABC2723 | pckA | ABC2723 | ABC2879 | Malic enzyme. | Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.441 |
ABC2723 | pycA | ABC2723 | ABC2395 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.932 |
citA | ABC0918 | ABC4043 | ABC0918 | Citrate synthase I; Belongs to the citrate synthase family. | Malic enzyme. | 0.838 |
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