STRINGSTRING
ADR35946.1 ADR35946.1 lig lig ADR35947.1 ADR35947.1 ADR35945.1 ADR35945.1 ADR35948.1 ADR35948.1 ADR35940.1 ADR35940.1 ADR35949.1 ADR35949.1 ADR35951.1 ADR35951.1 ADR35714.1 ADR35714.1 ADR35489.1 ADR35489.1 ADR37134.1 ADR37134.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ADR35946.1DNA polymerase LigD, polymerase domain protein; COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014145: IPR002755; KEGG: sti:Sthe_0314 DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; SPTR: DNA polymerase LigD, polymerase domain protein; TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain. (299 aa)    
Predicted Functional Partners:
lig
DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
   
 0.895
ADR35947.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: ttj:TTHA0369 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Dehydrogenase; PFAM: short chain dehydrogenase.
       0.773
ADR35945.1
Hypothetical protein; KEGG: rlt:Rleg2_3128 polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein.
       0.578
ADR35948.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395: IPR005399; KEGG: ttj:TTHA0027 potassium channel, beta subunit (oxidoreductase); PFAM: aldo/keto reductase; SPTR: Probable potassium channel, beta subunit (Oxidoreductase); PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal.
       0.572
ADR35940.1
Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: pmx:PERMA_0651 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72.
 
    0.526
ADR35949.1
KEGG: sun:SUN_1312 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Ergosterol biosynthesis ERG4/ERG24 family.
       0.478
ADR35951.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.476
ADR35714.1
Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: tra:Trad_0829 protein of unknown function DUF72; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72.
 
    0.440
ADR35489.1
PHP domain protein; COGs: COG1796 DNA polymerase IV (family X); InterPro IPR004013: IPR002054: IPR003141; KEGG: mrb:Mrub_2341 PHP domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; SPTR: PHP domain protein; PFAM: PHP domain.
     
 0.421
ADR37134.1
PHP domain protein; COGs: COG1796 DNA polymerase IV (family X); InterProIPR004013: IPR002008: IPR002054: IPR003583: IPR 003141; KEGG: msv:Mesil_1948 PHP domain protein; PFAM: PHP domain protein; SMART: DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; phosphoesterase PHP domain protein; SPTR: PHP domain protein; PFAM: PHP domain.
     
 0.421
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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