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gabT-3 gabT-3 betB-2 betB-2 gabD gabD ssdA ssdA aldA-3 aldA-3 gabD-2 gabD-2 mmsA mmsA yneI yneI fadB fadB fadJ fadJ panD panD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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gabT-3GabT; 4-aminobutyrate aminotransferase; Similar to Pantoea sp. At-9b, 4-aminobutyrate aminotransferase (NCBI: ZP_05732608.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (438 aa)    
Predicted Functional Partners:
betB-2
BetB; Betaine aldehyde dehydrogenase; Similar to Pantoea sp. At-9b, Aldehyde dehydrogenase (NAD(+)) (NCBI: ZP_05732550.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.938
gabD
GabD; Succinate-semialdehyde dehydrogenase [NADP+]; Similar to Pantoea sp. At-9b, succinic semialdehyde dehydrogenase (NCBI: ZP_05732551.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.931
ssdA
SsdA; Succinate-semialdehyde dehydrogenase [NADP+]; Similar to Pantoea sp. At-9b, Aldehyde Dehydrogenase (NCBI: ZP_05728942.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.917
aldA-3
AldA; Aldehyde dehydrogenase; Similar to Pantoea sp. At-9b, Aldehyde dehydrogenase (NAD(+)) (NCBI: ZP_05732550.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.917
gabD-2
GabD; Succinate-semialdehyde dehydrogenase [NADP+]; Similar to Enterobacter sp. 638, succinate semialdehyde dehydrogenase (NCBI: YP_001178384.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.917
mmsA
MmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]; Similar to Pantoea sp. At-9b, methylmalonate-semialdehyde dehydrogenase (NCBI: ZP_05731807.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
  
 0.917
yneI
YneI; Aldehyde dehydrogenase-like protein YneI; Similar to Pantoea sp. At-9b, Aldehyde Dehydrogenase (NCBI: ZP_05726943.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.917
fadB
FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
    
 0.913
fadJ
FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.913
panD
PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.906
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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