STRINGSTRING
crtI crtI crtB crtB crtY crtY crtE crtE crtX crtX crtZ crtZ idi idi aspH aspH folE folE ispA ispA dxs dxs
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
crtICrtI; Phytoene dehydrogenase; Similar to >sp|P21685.1|CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas,CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas(NCBI: P21685.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (492 aa)    
Predicted Functional Partners:
crtB
CrtB; Phytoene synthase; Similar to >sp|P21683.2|CRTB_PANAN RecName: Full=Phytoene synthas,CRTB_PANAN RecName: Full=Phytoene synthas(NCBI: P21683.2); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.999
crtY
CrtY; Lycopene cyclase; Similar to >sp|P21687.1|CRTY_PANAN RecName: Full=Lycopene cyclas,CRTY_PANAN RecName: Full=Lycopene cyclas(NCBI: P21687.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.998
crtE
CrtE; Geranylgeranyl pyrophosphate synthetase; Similar to >sp|P21684.1|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas,CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas(NCBI: P21684.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the FPP/GGPP synthase family.
 
  
 0.965
crtX
CrtX; Zeaxanthin glucosyl transferase; Similar to >sp|P21686.1|CRTX_PANAN RecName: Full=Zeaxanthin glucosyltransferas,CRTX_PANAN RecName: Full=Zeaxanthin glucosyltransferas(NCBI: P21686.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the UDP-glycosyltransferase family.
 
   
 0.960
crtZ
CrtZ; Beta-carotene hydroxylase; Similar to >sp|P21688.1|CRTZ_PANAN RecName: Full=Beta-carotene hydroxylas,CRTZ_PANAN RecName: Full=Beta-carotene hydroxylas(NCBI: P21688.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
   
 0.951
idi
Idi; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.873
aspH
AspH; Aspartyl/asparaginyl beta- hydroxylase; Similar to Erwinia pyrifoliae Ep1/96, hypothetical protein EpC_26840 (NCBI: YP_002649673.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Unknown.
      
 0.725
folE
FolE; GTP cyclohydrolase I; Similar to Pantoea sp. At-9b, GTP cyclohydrolase I (NCBI: ZP_05730896.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
 0.710
ispA
IspA; Geranyltranstransferase; Similar to Pantoea sp. At-9b, Polyprenyl synthetase (NCBI: ZP_05727464.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the FPP/GGPP synthase family.
  
  
 0.648
dxs
Dxs; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
   
  
 0.593
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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