STRINGSTRING
otd-1 otd-1 Optix Optix Btd Btd Tll Tll opa opa Hb Hb Hh Hh Kni Kni Sog Sog Ci Ci slp slp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otd-1Orthodenticle-1 protein. (371 aa)    
Predicted Functional Partners:
Optix
Sine oculis-related homeobox 3.
    
 
 0.689
Btd
Buttonhead.
    
 
 0.681
Tll
Tailless.
   
 
 0.653
opa
Odd-paired protein.
    
 
 0.636
Hb
Hunchback.
    
 
 0.613
Hh
Protein hedgehog-like Protein.
      
 0.600
Kni
Nuclear receptor domain-containing protein.
    
 
 0.598
Sog
Short-gastrulation; Belongs to the chordin family.
    
 
 0.597
Ci
Cubitus interruptus.
    
 
 0.582
slp
Sloppy-paired 2.
      
 0.571
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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