STRINGSTRING
ddlA3 ddlA3 murF murF alr alr murC murC wcw_1298 wcw_1298 ddlA1 ddlA1 murD murD murG murG murB murB ftsW ftsW rodA rodA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddlA3Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (380 aa)    
Predicted Functional Partners:
murF
Putative UDP-N-acetylmuramate--L-alanine ligase.
 
 
 0.997
alr
Putative bifunctional UDP-N-acetylmuramoyl- tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
 
 0.979
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
 0.971
wcw_1298
Hydrolase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.928
ddlA1
Conserved hypothetical protein; D-alanine-D-alanine ligase and related ATP- grasp enzymes.
   
 
 
0.900
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.837
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.724
murB
Putative UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
 0.696
ftsW
Septum-peptidoglycan biosynthetic protein; Bacterial cell division membrane protein; Belongs to the SEDS family.
 
  
 0.627
rodA
Septum-peptidoglycan biosynthetic protein; Bacterial cell division membrane protein; Belongs to the SEDS family.
 
  
 0.613
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.