STRINGSTRING
SBI_00764 SBI_00764 SBI_09063 SBI_09063 SBI_09666 SBI_09666 SBI_02277 SBI_02277 SBI_09065 SBI_09065 SBI_02278 SBI_02278 SBI_09689 SBI_09689 SBI_02155 SBI_02155 SBI_01313 SBI_01313 SBI_02270 SBI_02270 SBI_09142 SBI_09142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_00764Rhamnosidase. (1071 aa)    
Predicted Functional Partners:
SBI_09063
Secreted DNA-binding protein.
 
     0.766
SBI_09666
Hypothetical protein.
 
     0.706
SBI_02277
Short chain dehydrogenase.
 
 
 0.679
SBI_09065
Secreted protein.
 
     0.659
SBI_02278
Putative rhamnose kinase; COG1070 Sugar (pentulose and hexulose) kinases.
 
  
 0.648
SBI_09689
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.629
SBI_02155
Hypothetical protein.
 
     0.616
SBI_01313
Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase.
  
   
 0.611
SBI_02270
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
     0.550
SBI_09142
Hypothetical protein.
 
   0.525
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
Server load: low (22%) [HD]