Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SBI_00764 | SBI_01313 | Rhamnosidase. | Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase. | 0.611 |
SBI_00764 | SBI_02155 | Rhamnosidase. | Hypothetical protein. | 0.616 |
SBI_00764 | SBI_02270 | Rhamnosidase. | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.550 |
SBI_00764 | SBI_02277 | Rhamnosidase. | Short chain dehydrogenase. | 0.679 |
SBI_00764 | SBI_02278 | Rhamnosidase. | Putative rhamnose kinase; COG1070 Sugar (pentulose and hexulose) kinases. | 0.648 |
SBI_00764 | SBI_09063 | Rhamnosidase. | Secreted DNA-binding protein. | 0.766 |
SBI_00764 | SBI_09065 | Rhamnosidase. | Secreted protein. | 0.659 |
SBI_00764 | SBI_09142 | Rhamnosidase. | Hypothetical protein. | 0.525 |
SBI_00764 | SBI_09666 | Rhamnosidase. | Hypothetical protein. | 0.706 |
SBI_00764 | SBI_09689 | Rhamnosidase. | COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | 0.629 |
SBI_01313 | SBI_00764 | Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase. | Rhamnosidase. | 0.611 |
SBI_01313 | SBI_09063 | Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase. | Secreted DNA-binding protein. | 0.615 |
SBI_01313 | SBI_09142 | Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase. | Hypothetical protein. | 0.684 |
SBI_01313 | SBI_09689 | Glycoside hydrolase family alpha-L-fucosidase; COG3669 Alpha-L-fucosidase. | COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | 0.634 |
SBI_02155 | SBI_00764 | Hypothetical protein. | Rhamnosidase. | 0.616 |
SBI_02155 | SBI_02270 | Hypothetical protein. | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.790 |
SBI_02270 | SBI_00764 | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | Rhamnosidase. | 0.550 |
SBI_02270 | SBI_02155 | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | Hypothetical protein. | 0.790 |
SBI_02270 | SBI_02277 | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | Short chain dehydrogenase. | 0.513 |
SBI_02270 | SBI_02278 | Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose. | Putative rhamnose kinase; COG1070 Sugar (pentulose and hexulose) kinases. | 0.541 |
page 1 of 3