STRINGSTRING
zf(matrin)-2 zf(matrin)-2 LOC100184779 LOC100184779 F7AI93_CIOIN F7AI93_CIOIN LOC100178056 LOC100178056 LOC100177970 LOC100177970 F6Y1N2_CIOIN F6Y1N2_CIOIN LOC100178572 LOC100178572 LOC100180259 LOC100180259 LOC100178584 LOC100178584 LOC100178781 LOC100178781 LOC100181343 LOC100181343
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(matrin)-2Zinc finger protein. (349 aa)    
Predicted Functional Partners:
LOC100184779
Matrin-type domain-containing protein.
   
 0.999
F7AI93_CIOIN
Uncharacterized protein.
   
 0.998
LOC100178056
Splicing factor 3B subunit 3 isoform X1.
   
 0.997
LOC100177970
Splicing factor 3B subunit 4-like.
   
 0.997
F6Y1N2_CIOIN
PSP domain-containing protein.
   
 0.997
LOC100178572
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.997
LOC100180259
U2 small nuclear ribonucleoprotein A'-like.
    
 0.996
LOC100178584
Uncharacterized protein.
    
 0.993
LOC100178781
Small nuclear ribonucleoprotein-associated protein B-like.
   
 0.993
LOC100181343
RRM domain-containing protein.
   
 0.992
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (18%) [HD]