Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lft1 | lft2 | ENSDARP00000005312 | ENSDARP00000064677 | Left-right determination factor; Belongs to the TGF-beta family. | Left-right determination factor. | 0.925 |
lft1 | ndr1 | ENSDARP00000005312 | ENSDARP00000074144 | Left-right determination factor; Belongs to the TGF-beta family. | Nodal-related 1. | 0.996 |
lft1 | pitx2 | ENSDARP00000005312 | ENSDARP00000052568 | Left-right determination factor; Belongs to the TGF-beta family. | Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. | 0.874 |
lft1 | spaw | ENSDARP00000005312 | ENSDARP00000113959 | Left-right determination factor; Belongs to the TGF-beta family. | Southpaw. | 0.996 |
lft1 | tdgf1 | ENSDARP00000005312 | ENSDARP00000042440 | Left-right determination factor; Belongs to the TGF-beta family. | Teratocarcinoma-derived growth factor 1. | 0.934 |
lft1 | tgfb1a | ENSDARP00000005312 | ENSDARP00000060838 | Left-right determination factor; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.903 |
lft1 | tgfb1b | ENSDARP00000005312 | ENSDARP00000122056 | Left-right determination factor; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.903 |
lft1 | tgfb2 | ENSDARP00000005312 | ENSDARP00000123937 | Left-right determination factor; Belongs to the TGF-beta family. | Transforming growth factor, beta 2. | 0.903 |
lft1 | tgfb3 | ENSDARP00000005312 | ENSDARP00000025519 | Left-right determination factor; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.906 |
lft1 | tgfb5 | ENSDARP00000005312 | ENSDARP00000097449 | Left-right determination factor; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.903 |
lft2 | lft1 | ENSDARP00000064677 | ENSDARP00000005312 | Left-right determination factor. | Left-right determination factor; Belongs to the TGF-beta family. | 0.925 |
lft2 | ndr1 | ENSDARP00000064677 | ENSDARP00000074144 | Left-right determination factor. | Nodal-related 1. | 0.992 |
lft2 | pitx2 | ENSDARP00000064677 | ENSDARP00000052568 | Left-right determination factor. | Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. | 0.908 |
lft2 | spaw | ENSDARP00000064677 | ENSDARP00000113959 | Left-right determination factor. | Southpaw. | 0.996 |
lft2 | tdgf1 | ENSDARP00000064677 | ENSDARP00000042440 | Left-right determination factor. | Teratocarcinoma-derived growth factor 1. | 0.850 |
lft2 | tgfb1a | ENSDARP00000064677 | ENSDARP00000060838 | Left-right determination factor. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.903 |
lft2 | tgfb1b | ENSDARP00000064677 | ENSDARP00000122056 | Left-right determination factor. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.903 |
lft2 | tgfb2 | ENSDARP00000064677 | ENSDARP00000123937 | Left-right determination factor. | Transforming growth factor, beta 2. | 0.903 |
lft2 | tgfb3 | ENSDARP00000064677 | ENSDARP00000025519 | Left-right determination factor. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.906 |
lft2 | tgfb5 | ENSDARP00000064677 | ENSDARP00000097449 | Left-right determination factor. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.904 |
page 1 of 4