STRINGSTRING
nr2f5 nr2f5 ncor1 ncor1 rars1 rars1 nrip1b nrip1b chst2b chst2b zbtb16b zbtb16b nrip1a nrip1a nkx2.5 nkx2.5 vax2 vax2 nkx2.7 nkx2.7 ncoa3 ncoa3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
nr2f5Nuclear receptor subfamily 2 group F member 5; Putative receptor that is required in photoreceptor cells precursors during eye development; Belongs to the nuclear hormone receptor family. NR2 subfamily. (403 aa)    
Predicted Functional Partners:
ncor1
Nuclear receptor corepressor 1.
   
 
 0.680
rars1
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.650
nrip1b
Nuclear receptor-interacting protein 1b.
   
 
 0.525
chst2b
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.482
zbtb16b
Zinc finger and BTB domain-containing 16b.
   
 
 0.470
nrip1a
Nuclear receptor-interacting protein 1a.
    
 
 0.468
nkx2.5
NK2 homeobox 5.
   
 
 0.463
vax2
Ventral anterior homeobox 2; Transcription factor that may function in dorsoventral specification of the forebrain. Required for closure of the choroid fissure and together with vax1 is required for optic nerve differentiation and to limit retinal development to the optic cup. Belongs to the EMX homeobox family.
      
 0.453
nkx2.7
NK2 transcription factor-related 7.
   
 
 0.451
ncoa3
Nuclear receptor coactivator 3.
    
 
 0.428
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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