STRINGSTRING
vdac1 vdac1 bcl2l1 bcl2l1 mfn2 mfn2 sqstm1 sqstm1 prkn prkn slc25a5 slc25a5 mfn1b mfn1b ppid ppid slc25a4 slc25a4 slc25a6 slc25a6 A2CEZ0_DANRE A2CEZ0_DANRE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vdac1Voltage-dependent anion channel 1. (283 aa)    
Predicted Functional Partners:
bcl2l1
Bcl-XL-like protein 1.
    
 
 0.967
mfn2
Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.960
sqstm1
Sequestosome 1.
   
 0.943
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.939
slc25a5
Solute carrier family 25 member 5 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.922
mfn1b
Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.920
ppid
Peptidylprolyl isomerase D (Cyclophilin D).
   
 0.918
slc25a4
Solute carrier family 25 (Mitochondrial carrier adenine nucleotide translocator), member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.915
slc25a6
Solute carrier family 25 (Mitochondrial carrier adenine nucleotide translocator), member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.914
A2CEZ0_DANRE
Si:dkey-251i10.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.914
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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